Set the variables for the model piping automatic covarite selection

Set the variables for the model piping automatic covarite selection

Usage

rxSetPipingAuto(
  thetamodelVars = rex::rex(or("tv", "t", "pop", "POP", "Pop", "TV", "T", "cov", "err",
    "eff")),
  covariateExceptions = rex::rex(start, or("wt", "sex", "crcl", "kout"), end),
  etaParts = c("eta", "ETA", "Eta", "ppv", "PPV", "Ppv", "iiv", "Iiv", "bsv", "Bsv",
    "BSV", "bpv", "Bpv", "BPV", "psv", "PSV", "Psv")
)

Arguments

thetamodelVars

This is the prefixes for the theta model variables in a regular expression

covariateExceptions

This is a regular expression of covariates that should always be covariates

etaParts

This is the list of eta prefixes/post-fixes that identify a variable as a between subject variability

Value

Nothing, called for side effects

Details

This is called once at startup to set the defaults, though you can change this if you wish so that piping can work differently for your individual setup

See also

Other Model UI and piping: as.ini(), as.model(), as.rxUi(), coef.rxUi(), indLin(), ini.rxUi(), ini<-(), linCmtMicro(), linToOde(), model.function(), model<-(), modelExtract(), odeToLin(), rxAppendModel(), rxFixPop(), rxFixRes(), rxGetControl(), rxRemoveControl(), rxRename(), rxSetControl(), rxSetCovariateNamesForPiping(), rxUiDecompress(), rxode2<-(), update.rxUi(), zeroRe()

Author

Matthew L. Fidler

Examples

.vs <- utils::getFromNamespace(".varSelect", "rxode2")
.old <- list(.vs$thetamodelVars, .vs$covariateExceptions, .vs$etaParts)
# also always treat `age` as a covariate when piping
rxSetPipingAuto(covariateExceptions = "^(wt|sex|crcl|kout|age)$")
# restore the previous settings
do.call(rxSetPipingAuto, .old)