Package index
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addBaseline1exp()
- Add baseline that decays exponential with time
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addBaselineConst()
- Add an estimated baseline constant
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addBaselineExp()
- Add baseline that decays exponential with time
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addBaselineLin()
- Add an estimated baseline linear constant
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addCmtProp()
addBioavailability()
addLag()
addDur()
addRate()
addIni()
- Add a property to a compartment
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addDepot()
- To convert from infusion/intravenous administration to first-order oral absorption
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addDirToModelDb()
addFileToModelDb()
- Add a directory to the modeldb
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addDirectLin()
- Add direct linear effect with baseline=0
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addEffectCmtLin()
- Add effect compartment
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addEta()
- Add random effects to a model
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addIndirect()
- Add an indirect response model to a PK model
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addIndirectLin()
- Add linear indirect response model
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addLogEstimates()
- Add log estimates to a model
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addResErr()
- Add residual error to a model
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addTransit()
- To add transit compartments to the model
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addWeibullAbs()
- Converts first order absorption model to Weibull absorption model
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combinePaste2()
- Combine two strings using a naming convention
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convertEmax()
- Convert linear effect to Emax effect
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convertEmaxHill()
- Convert linear effect to Emax-Hill effect
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convertKinR0()
- Convert a kin/kout indirect response model to R0 and kout
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convertLogLin()
- Converts a linear effect to a log-linear effect
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convertMM()
- Convert models from linear elimination to Michaelis-Menten elimination
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convertQuad()
- Convert linear elimination to quadratic elimination
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defaultCombine()
snakeCombine()
camelCombine()
dotCombine()
blankCombine()
- Default combine strings
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fakeCc()
- Fake blank Cc for creating PD only models
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modeldb
- Model library for nlmixr2
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modellib()
- Get the model from the model library
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pkTrans()
- Change the transformation type for PK models
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readModelDb()
- Read a model from the nlmixr2 model database
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removeDepot()
- To convert from first order oral absorption to IV/Intravenous
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removeLinesAndInis()
- Removes lines and inis from a model
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removeTransit()
- To remove transit compartments from the model
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searchReplace()
searchReplaceHelper()
- Search within a model to replace part of the model
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setCombineType()
- Change the default combine type for the package
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updateOncologyXenograftSimeoni2004()
- Update an oncology xenograft model based on Simeoni 2004